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Bidirectional Functional Enrichment of Gene Expression Data
BD-Func is an algorithm to predict activation or inhibition of pathways based upon gene expression patterns.
If you use BD-Func, please cite:
Warden C, Kanaya N, Chen S, and Yuan Y-C. (2013) BD-Func: A Streamlined Algorithm for Predicting Activation and Inhibition of Pathways. peerJ, 1:e159
COHCAP (City of Hope CpG Island Analysis Pipeline, pronounced "co-cap") is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.).
Please note:
1) The SourceForge version of COHCAP is no longer being updated. Please see the GitHub version:
https://github.com/cwarden45/COHCAP
This was the source repository for the Bioconductor version, with some changes after the decision to only provide the code through...
CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
MicroStation by Bentley Systems is the trusted computer-aided design (CAD) software built specifically for infrastructure design.
Microstation enables architects, engineers, and designers to create precise 2D and 3D drawings that bring complex projects to life.
MicroStation is the only computer-aided design software for infrastructure design, helping architects and engineers like you bring their vision to life, present their designs to their clients, and deliver their projects to the community.