Activity for ONDEX Suite

AjitPS committed [r19438]

AjitPS — Wed, 22 Feb 2017 14:10:05 -0000

json export new concepts added

AjitPS committed [r19437]

AjitPS — Wed, 22 Feb 2017 13:58:33 -0000

Disease concept visual attributed edited

Marco Brandizi committed [r19436]

Marco Brandizi — Fri, 10 Feb 2017 14:15:49 -0000

JSON exporter plugin for KnetMaps updated

Marco Brandizi committed [r19434]

Marco Brandizi — Fri, 10 Feb 2017 14:15:41 -0000

Removing ondex-view-plugin, MetaDataEditor.

Marco Brandizi committed [r19435]

Marco Brandizi — Fri, 10 Feb 2017 14:15:41 -0000

Disabling outdated plugin-rd-ws.

Marco Brandizi committed [r19433]

Marco Brandizi — Fri, 10 Feb 2017 14:15:30 -0000

Git test commit

Marco Brandizi committed [r19432]

Marco Brandizi — Fri, 10 Feb 2017 14:15:30 -0000

ondex-all nbactions to launch

Marco Brandizi committed [r19431]

Marco Brandizi — Fri, 10 Feb 2017 14:15:18 -0000

cyJS plugin new concepts to visualize added

Marco Brandizi committed [r19430]

Marco Brandizi — Fri, 10 Feb 2017 14:15:05 -0000

More changes to exclude the 'chemical' module.

Marco Brandizi committed [r19429]

Marco Brandizi — Fri, 10 Feb 2017 14:15:01 -0000

Outdated module 'chemical' excluded from build....

Marco Brandizi committed [r19428]

Marco Brandizi — Thu, 02 Feb 2017 13:46:10 -0000

Exluding probably wrong version of DefConst

Marco Brandizi committed [r19427]

Marco Brandizi — Thu, 02 Feb 2017 13:43:42 -0000

Adding support to multiple ONDEX attritbutes. M...

Monika Mistry committed [r19426]

Monika Mistry — Thu, 02 Feb 2017 12:31:59 -0000

only uniprot/SGD accessions added to concepts

Monika Mistry committed [r19425]

Monika Mistry — Thu, 02 Feb 2017 12:30:41 -0000

only gene accessions added to gene concepts

AjitPS committed [r19424]

AjitPS — Wed, 01 Feb 2017 14:51:32 -0000

updated

Marco Brandizi committed [r19423]

Marco Brandizi — Wed, 01 Feb 2017 14:50:38 -0000

Testing SF permission change.

Monika Mistry committed [r19422]

Monika Mistry — Mon, 30 Jan 2017 12:08:52 -0000

SGD/Uniprot accessions

Monika Mistry committed [r19421]

Monika Mistry — Mon, 30 Jan 2017 10:24:01 -0000

Ensembl gene accessions ambiguous

Monika Mistry committed [r19420]

Monika Mistry — Mon, 30 Jan 2017 10:23:06 -0000

protein accessions ambiguous, gene accessions n...

Marco Brandizi committed [r19419]

Marco Brandizi — Fri, 27 Jan 2017 22:38:54 -0000

More clean-up of version from dependencies.

Marco Brandizi committed [r19418]

Marco Brandizi — Fri, 27 Jan 2017 21:33:01 -0000

Parameterising ondex module dependency version.

Marco Brandizi committed [r19417]

Marco Brandizi — Fri, 27 Jan 2017 19:58:27 -0000

Parameterising ONDEX POM dependencies.

Marco Brandizi committed [r19416]

Marco Brandizi — Fri, 27 Jan 2017 17:49:33 -0000

Minor changes to the POM.

Marco Brandizi committed [r19415]

Marco Brandizi — Fri, 27 Jan 2017 14:10:37 -0000

Removing all from POMs, when this is ...

Marco Brandizi committed [r19414]

Marco Brandizi — Fri, 27 Jan 2017 13:20:04 -0000

Moving to Java 8. Cleaning up POMs.

Marco Brandizi committed [r19413]

Marco Brandizi — Thu, 19 Jan 2017 15:38:11 -0000

Another GH/SVN test.

Marco Brandizi committed [r19412]

Marco Brandizi — Thu, 19 Jan 2017 13:23:03 -0000

Testing GH-SVN integration.

Marco Brandizi committed [r19411]

Marco Brandizi — Thu, 19 Jan 2017 13:19:38 -0000

Testing Git integration.

Marco Brandizi committed [r19410]

Marco Brandizi — Thu, 19 Jan 2017 09:51:50 -0000

Preparing github migration.

Marco Brandizi committed [r19409]

Marco Brandizi — Wed, 18 Jan 2017 18:22:08 -0000

Test with git-svn.

Marco Brandizi committed [r19408]

Marco Brandizi — Wed, 18 Jan 2017 17:44:32 -0000

Testing svn2git.

Marco Brandizi committed [r19407]

Marco Brandizi — Wed, 18 Jan 2017 16:47:09 -0000

Very minor improvement on comments.

AjitPS committed [r19406]

AjitPS — Mon, 16 Jan 2017 17:55:53 -0000

geneCName duplication issue fixed, eg,GA20ox1A

Marco Brandizi committed [r19405]

Marco Brandizi — Wed, 11 Jan 2017 12:23:56 -0000

Adding ignores

Marco Brandizi committed [r19404]

Marco Brandizi — Wed, 11 Jan 2017 12:19:25 -0000

Fixing the scripting engine that cannot be run ...

Marco Brandizi committed [r19403]

Marco Brandizi — Wed, 11 Jan 2017 12:14:51 -0000

Fixing bug that prevents PVALUE attributes to b...

Marco Brandizi committed [r19402]

Marco Brandizi — Tue, 10 Jan 2017 12:28:41 -0000

Adding Javascript plug-in.

Marco Brandizi committed [r19401]

Marco Brandizi — Tue, 10 Jan 2017 12:22:30 -0000

Adding JavaScript plug-in.

Marco Brandizi committed [r19400]

Marco Brandizi — Tue, 10 Jan 2017 12:08:30 -0000

Minor improvements.

Marco Brandizi committed [r19399]

Marco Brandizi — Fri, 06 Jan 2017 19:55:56 -0000

Element start-line added to the schema. Tests a...

Marco Brandizi committed [r19398]

Marco Brandizi — Thu, 05 Jan 2017 14:51:45 -0000

tab-parser-2 added to plugins shipped with onde...

Marco Brandizi committed [r19397]

Marco Brandizi — Wed, 04 Jan 2017 21:27:58 -0000

Adding tab-parser-2 as plugin to ONDEX installer.

Marco Brandizi committed [r19396]

Marco Brandizi — Wed, 21 Dec 2016 15:20:48 -0000

Making GraphEntityPrototype public.

Marco Brandizi committed [r19395]

Marco Brandizi — Wed, 21 Dec 2016 15:19:50 -0000

Minor improvement to the module's POM, tab-pars...

Marco Brandizi committed [r19394]

Marco Brandizi — Wed, 21 Dec 2016 15:18:31 -0000

Minor improvements to the top POM.

Marco Brandizi committed [r19393]

Marco Brandizi — Wed, 21 Dec 2016 15:12:54 -0000

A new tabular file parser plug-in, first commit.

Monika Mistry committed [r19392]

Monika Mistry — Thu, 15 Dec 2016 15:21:13 -0000

removed sysout println

Monika Mistry committed [r19391]

Monika Mistry — Thu, 15 Dec 2016 12:45:34 -0000

paralogGroup relations

Monika Mistry committed [r19390]

Monika Mistry — Thu, 15 Dec 2016 12:42:41 -0000

removed sysout println

Monika Mistry committed [r19389]

Monika Mistry — Wed, 07 Dec 2016 14:30:33 -0000

changed TAIR (".") ambiguous data sources

Monika Mistry committed [r19388]

Monika Mistry — Wed, 07 Dec 2016 14:13:26 -0000

Added SGD accession for yeast

Monika Mistry committed [r19387]

Monika Mistry — Tue, 06 Dec 2016 17:56:03 -0000

edits

Monika Mistry committed [r19386]

Monika Mistry — Tue, 06 Dec 2016 17:39:56 -0000

transformer_uniprot

Monika Mistry committed [r19385]

Monika Mistry — Tue, 06 Dec 2016 17:30:24 -0000

orthoxml0_3 new_changes_for_OMA_data

Monika Mistry committed [r19384]

Monika Mistry — Tue, 06 Dec 2016 17:16:50 -0000

unknown datasources

Monika Mistry committed [r19383]

Monika Mistry — Tue, 06 Dec 2016 17:14:07 -0000

xref omitted in genericobo parser

Monika Mistry committed [r19382]

Monika Mistry — Tue, 06 Dec 2016 16:57:13 -0000

Added paralog relations. Split protId

Monika Mistry committed [r19381]

Monika Mistry — Tue, 06 Dec 2016 16:39:32 -0000

Just a credendials test.

Marco Brandizi committed [r19380]

Marco Brandizi — Tue, 06 Dec 2016 16:13:48 -0000

Just a credentials test.

AjitPS committed [r19379]

AjitPS — Mon, 05 Dec 2016 12:08:51 -0000

e_fetch WS issue fix

AjitPS committed [r19378]

AjitPS — Mon, 05 Dec 2016 12:08:35 -0000

e_fetch WS url changed from http to https to av...

AjitPS committed [r19377]

AjitPS — Tue, 15 Nov 2016 12:13:54 -0000

doc_updated

AjitPS committed [r19376]

AjitPS — Mon, 14 Nov 2016 18:02:13 -0000

uniprot parser modified to omit extra accession...

AjitPS committed [r19375]

AjitPS — Wed, 05 Oct 2016 15:47:27 -0000

cyjs_json parser cleanup

AjitPS committed [r19374]

AjitPS — Wed, 05 Oct 2016 15:46:01 -0000

cyjs_json parser cleanup

AjitPS committed [r19373]

AjitPS — Wed, 05 Oct 2016 15:42:36 -0000

cyjs_json parser cleanup

AjitPS committed [r19372]

AjitPS — Thu, 29 Sep 2016 16:36:53 -0000

jsonIO parser updated in trunk

AjitPS committed [r19371]

AjitPS — Thu, 29 Sep 2016 16:33:24 -0000

jsonIO parser updated

AjitPS committed [r19370]

AjitPS — Thu, 29 Sep 2016 16:28:06 -0000

cyjs_json parser updated- AddConceptNodeInfo cl...

AjitPS committed [r19369]

AjitPS — Thu, 29 Sep 2016 16:24:48 -0000

cyjs_json parser updated- visual concept attrib...

AjitPS committed [r19368]

AjitPS — Thu, 29 Sep 2016 16:07:23 -0000

cyjs_json parser updated- visual concept attrib...

AjitPS committed [r19367]

AjitPS — Wed, 17 Aug 2016 17:19:39 -0000

updated_160816_tested_for_Wheat_Gene-Protein

AjitPS committed [r19366]

AjitPS — Wed, 17 Aug 2016 16:54:04 -0000

merged changes from trunk_sequence

AjitPS committed [r19365]

AjitPS — Wed, 17 Aug 2016 15:40:15 -0000

testCommit_160816

Keywan committed [r19364]

Keywan — Tue, 09 Aug 2016 16:15:20 -0000

small fix to attLocation

Keywan committed [r19363]

Keywan — Tue, 09 Aug 2016 16:11:27 -0000

Only parse primary accession

Keywan committed [r19362]

Keywan — Tue, 09 Aug 2016 16:08:32 -0000

Tidy up the code

Keywan committed [r19361]

Keywan — Tue, 09 Aug 2016 11:11:11 -0000

Parse biotype and add as description

Keywan committed [r19360]

Keywan — Mon, 08 Aug 2016 21:26:13 -0000

Create pub_in relations to Publication concepts

Keywan committed [r19359]

Keywan — Mon, 08 Aug 2016 21:15:27 -0000

remote tags

Keywan committed [r19358]

Keywan — Mon, 08 Aug 2016 16:33:25 -0000

Major change: Not store AA sequence to reduce s...

Keywan committed [r19357]

Keywan — Mon, 08 Aug 2016 16:23:25 -0000

Set EC tags if parameter is set

Keywan committed [r19356]

Keywan — Mon, 08 Aug 2016 15:58:58 -0000

Test commit

AjitPS committed [r19355]

AjitPS — Mon, 08 Aug 2016 15:38:36 -0000

fastagff_parser_updated_for_Wheat_gff3

AjitPS committed [r19354]

AjitPS — Mon, 08 Aug 2016 13:14:40 -0000

gff3_parser_Wheat_tested

AjitPS committed [r19353]

AjitPS — Fri, 05 Aug 2016 16:26:08 -0000

changed chromosome from Integer to String in on...

AjitPS committed [r19352]

AjitPS — Fri, 05 Aug 2016 16:24:59 -0000

changed chromosome from Integer to String in on...

AjitPS committed [r19351]

AjitPS — Fri, 05 Aug 2016 09:30:13 -0000

fastagff_Parser_geneDescription_removed_for_now...

AjitPS committed [r19350]

AjitPS — Thu, 04 Aug 2016 14:14:47 -0000

fastagff_Parser_Wheat_ChrName_Location_Aug2016

AjitPS committed [r19349]

AjitPS — Thu, 04 Aug 2016 12:36:29 -0000

fastagff_Parser_updated_forWheat_chromosomes_Au...

AjitPS committed [r19348]

AjitPS — Wed, 03 Aug 2016 13:03:59 -0000

fastagff_Parser_pom_edited_Aug2016

AjitPS committed [r19347]

AjitPS — Wed, 03 Aug 2016 13:03:44 -0000

fastagff_Parser_newCHanges_Aug2016

AjitPS committed [r19346]

AjitPS — Tue, 17 May 2016 14:09:31 -0000

New orthoXML 0.3 plugin _17-05-2016

AjitPS committed [r19345]

AjitPS — Tue, 17 May 2016 14:04:02 -0000

orthoXML_2_newCode_and_testFiles

AjitPS committed [r19344]

AjitPS — Thu, 12 May 2016 15:20:08 -0000

orthoXML_fixes

AjitPS committed [r19343]

AjitPS — Thu, 12 May 2016 13:56:38 -0000

new branch to fix and extend orthoXML parser (p...

AjitPS committed [r19342]

AjitPS — Thu, 12 May 2016 13:51:57 -0000

uniprot_parser_disease_fixes

AjitPS committed [r19341]

AjitPS — Thu, 12 May 2016 13:48:34 -0000

Uniprot parser (local) work in progress, change...

AjitPS committed [r19340]

AjitPS — Thu, 12 May 2016 13:45:29 -0000

sequence module copied with uniprot parser chan...

AjitPS committed [r19339]

AjitPS — Fri, 16 Oct 2015 10:14:46 -0000

jsonIO_Exporter_evidenceTypes_testOXL